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公开(公告)号:US10984888B2
公开(公告)日:2021-04-20
申请号:US14428312
申请日:2013-09-13
发明人: Nivedita Sumi Majumdar , Thomas Wessel , David C. Woo , Marcin Sikora , Gordon A. Janaway , Shweta Raizada , Joanna Lankester , Jeffrey A. Marks , Daniel Wessel
摘要: A computer-implemented method for designing a digital PCR (dPCR) experiment is provided. The method includes receiving, from a user, a selection of optimization type. The optimization type may be maximizing the dynamic range, minimizing the number of substrates including reaction sites needed for the experiment, determining a dilution factor, or determining the lower limit of detection, for example. The method further includes receiving, from the user, a precision measure for an experiment, and a minimum concentration of a target in a reaction site for the experiment. The method also includes determining a set of dPCR experiment design factors for the experiment based on the optimization type. The set of dPCR experiment design factors is then displayed to the user.
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2.
公开(公告)号:US10908164B2
公开(公告)日:2021-02-02
申请号:US15460491
申请日:2017-03-16
发明人: Peter Slade
IPC分类号: G01N33/68 , G01N27/447 , C12Q1/34
摘要: An apparatus for glycan analysis is disclosed. The apparatus includes a plurality of loading wells adapted to receive a plurality of samples; a plurality of capillaries arranged in correspondence with the loading wells, each of the capillaries including a first portion including a stacking gel and a second portion including a resolving gel; and a plurality of eluting wells arranged in correspondence with the capillaries and adapted to receive a portion of the samples having traversed the capillaries.
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公开(公告)号:USD901306S1
公开(公告)日:2020-11-10
申请号:US29680401
申请日:2019-02-15
设计人: Paul Clark , Sandro Klein , Xin Mathers , Jeffrey Kelly , David Judd , Scott Glassman , Michael Scribner , Adrian Bird , Imran Mahmood
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公开(公告)号:US10428327B2
公开(公告)日:2019-10-01
申请号:US15605586
申请日:2017-05-25
发明人: Xiquan Liang , Robert Potter , Namritha Ravinder
IPC分类号: C12N15/10 , C12N15/113 , C12N15/90
摘要: The present disclosure generally relates to compositions and methods for improving the efficiency of homologous recombination. In particular, the disclosure relates to reagents and the use of such reagents.
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公开(公告)号:US10329544B2
公开(公告)日:2019-06-25
申请号:US15091717
申请日:2016-04-06
发明人: Chieh-Yuan Li , David Ruff , Shiaw-Min Chen , Jennifer O'Neil , Rachel Kasinskas , Jonathan Rothberg , Bin Li , Kai Qin Lao , Wolfgang Hinz
IPC分类号: C12Q1/68 , C12N9/12 , C12Q1/6853 , C12Q1/6844 , C12Q1/6855 , C12Q1/686 , C12Q1/6874
摘要: In some embodiments, the present teachings provide methods for nucleic acid amplification, comprising forming a reaction mixture, and subjecting the reaction mixture to conditions suitable for nucleic acid amplification. In some embodiments, methods for nucleic acid amplification include subjecting the nucleic acid to be amplified to partially denaturing conditions. In some embodiments, methods for nucleic acid amplification include amplifying without fully denaturing the nucleic acid that is amplified. In some embodiments, the methods for nucleic acid amplification employ an enzyme that catalyzes homologous recombination and a polymerase. In some embodiments, methods for nucleic acid amplification can be conducted in a single reaction vessel. In some embodiments, methods for nucleic acid amplification can be conducted in a single continuous liquid phase of a reaction mixture, without need for compartmentalization of the reaction mixture or immobilization of reaction components. In some embodiments, methods for nucleic acid amplification comprise a amplifying at least one polynucleotide onto a surface under isothermal amplification conditions, optionally in the presence of a polymer. The polymer can include a sieving agent and/or a diffusion-reducing agent.
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公开(公告)号:US10240134B2
公开(公告)日:2019-03-26
申请号:US15481858
申请日:2017-04-07
发明人: Peter Vander Horn , Daniel Mazur , Theo Nikiforov , Mindy Landes , Eileen Tozer
IPC分类号: C12N9/12 , C12Q1/68 , C12Q1/686 , C12Q1/6869
摘要: The present disclosure provides compositions, methods, kits, systems and apparatus that are useful for nucleic acid polymerization. In particular, modified polymerases and biologically active fragments thereof are provided that allow for nucleic acid amplification. In some aspects, the disclosure provides modified polymerases having lower systematic error as compared to a reference polymerase. In one aspect, the disclosure relates to modified polymerases useful for nucleic acid sequencing, genotyping, copy number variation analysis, paired-end sequencing and other forms of genetic analysis. In some aspects, the disclosure relates to modified polymerases useful for the generation of nucleic acid libraries or nucleic acid templates. In some aspects, the disclosure relates to the identification of homologous amino acid mutations that can be transferred across classes or families of polymerases to provide novel polymerases with altered properties.
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公开(公告)号:US10113195B2
公开(公告)日:2018-10-30
申请号:US14789922
申请日:2015-07-01
发明人: Chieh-Yuan Li , David Ruff , Jennifer O'Neil , Rachel Kasinskas , Shiaw-Min Chen , Jonathan Rothberg , Bin Li , Kai Qin Lao
IPC分类号: C12Q1/68 , C12Q1/6844 , C12Q1/6874
摘要: In some embodiments, the present teachings provide methods for nucleic acid amplification, comprising forming a reaction mixture, and subjecting the reaction mixture to conditions suitable for nucleic acid amplification. In some embodiments, methods for nucleic acid amplification include subjecting the nucleic acid to be amplified to partially denaturing conditions. In some embodiments, methods for nucleic acid amplification include amplifying without fully denaturing the nucleic acid that is amplified. In some embodiments, the methods for nucleic acid amplification employ an enzyme that catalyzes homologous recombination and a polymerase. In some embodiments, methods for nucleic acid amplification can be conducted in a single reaction vessel. In some embodiments, methods for nucleic acid amplification can be conducted in a single continuous liquid phase of a reaction mixture, without need for compartmentalization of the reaction mixture or immobilization of reaction components. In some embodiments, methods for nucleic acid amplification comprise a amplifying at least one polynucleotide onto a surface under isothermal amplification conditions, optionally in the presence of a polymer. The polymer can include a sieving agent and/or a diffusion-reducing agent.
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8.
公开(公告)号:US09310315B2
公开(公告)日:2016-04-12
申请号:US14192711
申请日:2014-02-27
发明人: Yu-Zhong Zhang
CPC分类号: G01N21/91 , C07F5/022 , Y10T428/24355
摘要: Lipophilic fluorescent substances can be used to detect surface defects in materials having hydrophilic (e.g., inorganic) coatings. Use of the described methods makes surface defects appear fluorescent, while the remaining surfaces are not labeled. The disclosed methods are inexpensive, rapid, and easy alternatives to existing approaches.
摘要翻译: 亲脂性荧光物质可用于检测具有亲水(例如无机)涂层的材料中的表面缺陷。 使用所述方法会使表面缺陷出现荧光,而其余表面未标记。 所公开的方法是便宜,快速和容易的替代现有方法。
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公开(公告)号:US09297762B2
公开(公告)日:2016-03-29
申请号:US14827545
申请日:2015-08-17
发明人: Stephen Empedocles , Andrew Watson , Jian Jin
IPC分类号: G01N21/75 , G01N21/64 , G01N21/27 , B01L3/00 , G01N21/25 , G01N33/543 , G01N35/00 , B82Y30/00 , C40B40/06 , C40B60/14 , G01N15/00 , G01N15/14
CPC分类号: G01N21/272 , B01J2219/00317 , B01J2219/00432 , B01J2219/005 , B01J2219/00574 , B01J2219/00576 , B01J2219/00578 , B01J2219/00585 , B01J2219/00596 , B01J2219/00648 , B01J2219/00657 , B01J2219/00659 , B01J2219/00677 , B01J2219/00707 , B01J2219/00722 , B01J2219/00743 , B01L3/5025 , B01L3/502715 , B01L3/502761 , B01L3/5085 , B01L3/545 , B01L2200/0668 , B01L2300/021 , B01L2300/0819 , B01L2300/0829 , B01L2400/0454 , B01L2400/0457 , B82Y30/00 , C40B40/06 , C40B60/14 , G01N21/25 , G01N21/253 , G01N21/274 , G01N21/278 , G01N21/6428 , G01N21/6452 , G01N21/6456 , G01N21/6486 , G01N21/6489 , G01N33/54373 , G01N2015/0092 , G01N2015/1472 , G01N2015/1497 , G01N2021/6441 , G01N2021/6482 , G01N2035/00158 , G01N2035/00742 , G01N2035/00752 , G01N2201/04 , G01N2201/06113 , G01N2201/12
摘要: Devices, systems, kits, and methods for detecting and/or identifying a plurality of spectrally labeled bodies well-suited for performing multiplexed assays. By spectrally labeling the beads with materials which generate identifiable spectra, a plurality of beads may be identified within the fluid. Reading of the beads is facilitated by restraining the beads in arrays, and/or using a focused laser.
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公开(公告)号:US09150922B2
公开(公告)日:2015-10-06
申请号:US14109475
申请日:2013-12-17
发明人: Rosaria Haugland , Ching-Ying Cheung , Stephen Yue
IPC分类号: C07D401/04 , C07D209/14 , C12Q1/68 , C07D209/12 , C07D209/24 , C09B23/12
CPC分类号: C12Q1/6876 , C07D209/12 , C07D209/14 , C07D209/24 , C07D401/04 , C09B23/12
摘要: The present invention provides methods and non-fluorescent carbocyanine quencher compounds having the general formula: Wherein the A moiety is a substituted pyridinium, unsubstituted pyridinium, substituted quinolinium, unsubstituted quinolinium, substituted benzazolium, unsubstituted benzazolium, substituted indolinium, or substituted indolinium. The invention further provides luminescent donor molecule-quencher pairs and luminescent donor molecule-quencher-luminescent acceptor molecule conjugates wherein the quencher is a cyanine compound of the present invention. The energy transfer pairs are used to detect an analyte of interest in a sample.
摘要翻译: 本发明提供了具有以下通式的方法和非荧光碳花青猝灭剂:其中A部分是取代的吡啶鎓,未取代的吡啶鎓,取代的喹啉鎓,未取代的喹啉鎓,取代的苯并唑鎓,未取代的苯并咪唑鎓,取代的吲哚鎓或取代的吲哚啉鎓。 本发明还提供了发光供体分子猝灭剂对和发光供体分子 - 猝灭剂 - 发光受体分子缀合物,其中猝灭剂是本发明的花青化合物。 能量转移对用于检测样品中感兴趣的分析物。
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