-
公开(公告)号:US20250129415A1
公开(公告)日:2025-04-24
申请号:US18565027
申请日:2022-06-30
Applicant: Illumina, Inc.
Inventor: Jeffrey Mandell , Boyan Boyanov
IPC: C12Q1/6869 , G01N27/12
Abstract: Polynucleotide sequencing using ionophores is provided herein. In some examples, a sequencing method includes inhibiting current flow across a barrier; contacting a polymerase with a first polynucleotide, a second polynucleotide, and a fluid comprising a first nucleotide coupled to a first ionophore; while the polymerase adds the first nucleotide to the second polynucleotide based on a sequence of the first polynucleotide, providing a first current flow across the barrier using the first ionophore; and identifying the first nucleotide using an electrical characteristic of the first ionophore.
-
公开(公告)号:US12241835B2
公开(公告)日:2025-03-04
申请号:US18313015
申请日:2023-05-05
Applicant: ILLUMINA, INC.
Inventor: Tracy Helen Fung , Xiuyu Cai , Lisa Kwok , Hai Tran , Kevan Samiee , Liangliang Qiang , Boyan Boyanov
IPC: G01N21/64 , B01L3/00 , G01N15/1434 , G01N21/77
Abstract: An example sensor includes a flow cell, a detection device, and a controller. The flow cell includes a passivation layer having opposed surfaces and a reaction site at a first of the opposed surfaces. The flow cell also includes a lid operatively connected to the passivation layer to partially define a flow channel between the lid and the reaction site. The detection device is in contact with a second of the opposed surfaces of the passivation layer, and includes an embedded metal layer that is electrically isolated from other detection circuitry of the detection device. The controller is to ground the embedded metal layer.
-
公开(公告)号:US20240302738A1
公开(公告)日:2024-09-12
申请号:US18667993
申请日:2024-05-17
Applicant: ILLUMINA, INC.
Inventor: Jeffrey S. Fisher , Brian D. Mather , Maria Candelaria Rogert Bacigalupo , Justin Fullerton , Ludovic Vincent , Lewis J. Kraft , Sahngki Hong , Boyan Boyanov , M. Shane Bowen , Sang Park , Wayne N. George , Andrew A. Brown , Dajun Yuan
IPC: G03F7/00 , C08F220/56 , C08G77/04 , C12Q1/6869 , G03F7/004 , G03F7/075 , G03F7/16
CPC classification number: G03F7/0002 , C08F220/56 , C08G77/04 , C12Q1/6869 , G03F7/0757 , G03F7/165 , G03F7/0046
Abstract: An example of a flow cell includes a substrate; a first primer set attached to a first region on the substrate, the first primer set including an un-cleavable first primer and a cleavable second primer; and a second primer set attached to a second region on the substrate, the second primer set including a cleavable first primer and an un-cleavable second primer.
-
公开(公告)号:US12050194B2
公开(公告)日:2024-07-30
申请号:US17257464
申请日:2020-01-24
Applicant: ILLUMINA, INC.
Inventor: Jeffrey S. Fisher , Brian D. Mather , Kaitlin M. Pugliese , Jeffrey G. Mandell , Maria Candelaria Rogert Bacigalupo , Boyan Boyanov
IPC: G01N27/414 , C12Q1/00 , C12Q1/48 , C12Q1/6825
CPC classification number: G01N27/4145 , C12Q1/001 , C12Q1/48 , C12Q1/6825
Abstract: In an example, a sensing system includes a pH sensor. The pH sensor includes two electrodes and a conductive channel operatively connected to the two electrodes. A complex is attached to the conductive channel of the pH sensor. The complex includes a polymerase linked to at least one pH altering moiety that is to participate in generating a pH change within proximity of the conductive channel from consumption of a secondary substrate in a fluid that is exposed to the pH sensor. The at least one pH altering moiety is selected from the group consisting of an enzyme, a metal coordination complex, a co-factor, and an activator.
-
公开(公告)号:US11988957B2
公开(公告)日:2024-05-21
申请号:US18317865
申请日:2023-05-15
Applicant: ILLUMINA, INC. , ILLUMINA CAMBRIDGE LIMITED
Inventor: Jeffrey S. Fisher , Brian D. Mather , Maria Candelaria Rogert Bacigalupo , Justin Fullerton , Ludovic Vincent , Lewis J. Kraft , Sahngki Hong , Boyan Boyanov , M. Shane Bowen , Sang Park , Wayne N. George , Andrew A. Brown
IPC: G03F7/00 , C08F220/56 , C08G77/04 , C12Q1/6869 , G03F7/075 , G03F7/16 , G03F7/004
CPC classification number: G03F7/0002 , C08F220/56 , C08G77/04 , C12Q1/6869 , G03F7/0757 , G03F7/165 , G03F7/0046
Abstract: An example of a flow cell includes a substrate; a first primer set attached to a first region on the substrate, the first primer set including an un-cleavable first primer and a cleavable second primer; and a second primer set attached to a second region on the substrate, the second primer set including a cleavable first primer and an un-cleavable second primer.
-
公开(公告)号:US20240094189A1
公开(公告)日:2024-03-21
申请号:US18003883
申请日:2022-03-15
Applicant: Illumina, Inc.
Inventor: John Moon , Boyan Boyanov
IPC: G01N33/487
CPC classification number: G01N33/48721
Abstract: In one aspect, the disclosed technology relates to systems and methods for sequencing polynucleotides. In one embodiment, the disclosed technology relates to a nanopore sensor device for identifying nucleotides, the nanopore sensor device including: one or more cis wells; one or more cis electrodes associated with the one or more cis wells; a plurality of trans wells, each of the plurality of trans wells separated from the one or more cis wells by a lipid or solid-state membrane having a nanopore; a plurality of field effect transistors (FETs), each of the plurality of FETs associated with one of the plurality of trans wells; an electrical source configured to provide alternating current (AC) inputs between the one or more cis electrodes and the source terminals of the plurality of FETs; and a controller operably coupled to the plurality of FETs, the controller configured to measure AC responses of the plurality of FETs, wherein the AC responses depend on the identities of the nucleotides within or near the nanopores.
-
7.
公开(公告)号:US20240001361A1
公开(公告)日:2024-01-04
申请号:US18369587
申请日:2023-09-18
Applicant: ILLUMINA, INC.
Inventor: Sebastian Bohm , Alex Aravanis , Alexander Hsiao , Behnam Javanmardi , Tarun Kumar Khurana , Hai Quang Tran , Majid Aghababazadeh , M. Shane Bowen , Boyan Boyanov , Dale Buermann
IPC: B01L3/00 , B01L7/00 , F16K99/00 , G01N35/08 , C12Q1/6869
CPC classification number: B01L3/502738 , B01L3/50273 , B01L7/52 , F16K99/0013 , F16K99/0028 , F16K99/0015 , G01N35/08 , B01L3/502715 , C12Q1/6869 , B01L2400/0644 , B01L2200/10 , B01L2300/0816 , B01L2300/0867 , B01L2400/0487 , F16K2099/0084 , B01L2400/0655
Abstract: Systems and methods for conducting designated reactions that include a fluidic network having a sample channel, a reaction chamber, and a reservoir. The sample channel is in flow communication with a sample port. The system also includes a rotary valve that has a flow channel and is configured to rotate between first and second valve positions. The flow channel fluidically couples the reaction chamber and the sample channel when the rotary valve is in the first valve position and fluidically couples the reservoir and the reaction chamber when the rotary valve is in the second valve position. A pump assembly induces a flow of a biological sample toward the reaction chamber when the rotary valve is in the first valve position and induces a flow of a reaction component from the reservoir toward the reaction chamber when the rotary valve is in the second valve position.
-
公开(公告)号:US11732301B2
公开(公告)日:2023-08-22
申请号:US17188193
申请日:2021-03-01
Applicant: Illumina, Inc.
Inventor: Boyan Boyanov , Jeffrey G Mandell , Kevin L Gunderson , Jingwei Bai , Liangliang Qiang , Bradley Baas
IPC: C12Q1/6874 , G01N33/487 , G01N27/447
CPC classification number: C12Q1/6874 , G01N27/44782 , G01N27/44791 , G01N33/48721
Abstract: The disclosure provides detection apparatus having one or more nanopores, methods for making apparatus having one or more nanopore and methods for using apparatus having one or more nanopores. Uses include, but are not limited to detection and sequencing of nucleic acids.
-
公开(公告)号:US20180141020A1
公开(公告)日:2018-05-24
申请号:US15535695
申请日:2015-12-14
Applicant: Illumina, Inc.
Inventor: Kevin L. Gunderson , Jingwei Bai , Boyan Boyanov
IPC: B01J19/00
CPC classification number: B01J19/0046 , B01J2219/00274 , C12Q1/68 , C12Q1/6837 , C12Q2565/543 , C12Q2521/543
Abstract: Provided herein are methods and compositions for placing single target molecules on a patterned substrate.
-
公开(公告)号:US20240110889A1
公开(公告)日:2024-04-04
申请号:US18471484
申请日:2023-09-21
Applicant: ILLUMINA, INC.
Inventor: Boyan Boyanov
IPC: G01N27/447 , C12Q1/6869
CPC classification number: G01N27/44713 , C12Q1/6869 , G01N27/44791
Abstract: Sequencing systems and methods are provided that include a nanopore well that includes a cis well associated with a cis electrode and a trans well associated with a trans electrode, a membrane separating the cis well and the trans well, and a nanopore well embedded in the membrane providing a channel through the membrane; a command node connected directly to the nanopore well. The command node is configured to apply a potential across the nanopore well and a command pulse. The system further includes an amplifier with a feedback loop coupled to the nanopore well and a switch disposed between the amplifier and the nanopore well. The switch is driven by a clock pulse and configured to ground an inverting input of the amplifier.
-
-
-
-
-
-
-
-
-