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公开(公告)号:US20250155352A1
公开(公告)日:2025-05-15
申请号:US19020951
申请日:2025-01-14
Applicant: Becton, Dickinson and Company
Inventor: Jonathan Lin , Joseph T. Trotter , Keegan O. Owsley
IPC: G01N15/1429 , G01N15/01 , G01N15/14 , G01N15/1404 , G01N15/1434 , G06F16/20 , G06F16/28 , G06N3/08 , G06N7/06 , G06N20/00
Abstract: Non-parametric transforms such as t-distributed stochastic neighbor embedding (tSNE) are used to analyze multi-parametric data such as data derived from flow cytometry or other particle analysis systems and methods. These transforms may be included for dimensionality reduction and identification of subpopulations (e.g., gating). By nature, non-parametric transforms cannot transform new observations without training a new transformation based on the entire dataset including the new observations. The features described parameterize non-parametric transforms using a neural network thereby allowing a small training dataset to be transformed using non-parametric techniques. The training dataset may then be used to generate an accurate parametric model for assessing additional events in a manner consistent with the initial events.
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公开(公告)号:US12270750B2
公开(公告)日:2025-04-08
申请号:US18641039
申请日:2024-04-19
Applicant: Becton, Dickinson and Company
Inventor: Joseph T. Trotter , Keegan Owsley , Jonathan Lin
IPC: G01N15/14 , B07C5/342 , B07C5/36 , G01N15/1434 , G01N15/149 , G06V10/70 , G06V20/69 , G16C20/20
Abstract: A cell sorting system that automatically generates a sorting strategy based on examples of target events provided by an operator. The target events can be selected using measurements ranging from traditional flow cytometry measurements to derived measurements that are computationally expensive to complex measurements such as images.
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公开(公告)号:US20240353309A1
公开(公告)日:2024-10-24
申请号:US18734985
申请日:2024-06-05
Applicant: BECTON, DICKINSON AND COMPANY
Inventor: Eric D. Diebold , Keegan Owsley , Jonathan Lin
IPC: G01N15/1434 , G01N15/10 , G01N15/14 , G01N15/1429 , G01N15/1433 , G01N21/64 , G02B21/06
CPC classification number: G01N15/1434 , G01N15/14 , G01N15/1425 , G01N15/1429 , G01N15/1433 , G01N15/147 , G01N21/645 , G02B21/06 , G01N2015/1006 , G01N2015/1447 , G01N2015/1454 , G01N2021/6482
Abstract: In one aspect, the present teachings provide a system for performing cytometry that can be operated in three operational modes. In one operational mode, a fluorescence image of a sample is obtained by exciting one or more fluorophore(s) present in the sample by an excitation beam formed as a superposition of a top-hat-shaped beam with a plurality of beams that are radiofrequency shifted relative to one another. In another operational mode, a sample can be illuminated successively over a time interval by a laser beam at a plurality of excitation frequencies in a scanning fashion. The fluorescence emission from the sample can be detected and analyzed, e.g., to generate a fluorescence image of the sample. In yet another operational mode, the system can be operated to illuminate a plurality of locations of a sample concurrently by a single excitation frequency, which can be generated, e.g., by shifting the central frequency of a laser beam by a radiofrequency. For example, a horizontal extent of the sample can be illuminated by a laser beam at a single excitation frequency. The detected fluorescence radiation can be used to analyze the fluorescence content of the sample, e.g., a cell/particle.
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公开(公告)号:US11808690B2
公开(公告)日:2023-11-07
申请号:US18095908
申请日:2023-01-11
Applicant: Becton, Dickinson and Company
Inventor: Jonathan Lin , Keegan Owsley , Matthew Bahr
IPC: G01N15/14
CPC classification number: G01N15/1459 , G01N15/1425 , G01N15/1429 , G01N15/1434 , G01N2015/1402 , G01N2015/142 , G01N2015/149 , G01N2015/1486
Abstract: Aspects of the present disclosure include methods for characterizing particles of a sample in a flow stream. Methods according to certain embodiments include generating frequency-encoded fluorescence data from a particle of a sample in a flow stream; and calculating phase-corrected spatial data of the particle by performing a transform of the frequency-encoded fluorescence data with a phase correction component. In certain embodiments, methods include generating an image of the particle in the flow stream based on the phase-corrected spatial data. Systems having a processor with memory operably coupled to the processor having instructions stored thereon, which when executed by the processor, cause the processor to calculate phase-corrected spatial data from frequency-encoded fluorescence data of a particle a flow stream are also described. Integrated circuit devices (e.g., field programmable gate arrays) having programming for practicing the subject methods are also provided.
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公开(公告)号:US20230144214A1
公开(公告)日:2023-05-11
申请号:US18095908
申请日:2023-01-11
Applicant: Becton, Dickinson and Company
Inventor: Jonathan Lin , Keegan Owsley , Matthew Bahr
IPC: G01N15/14
CPC classification number: G01N15/1459 , G01N15/1434 , G01N15/1425 , G01N15/1429 , G01N2015/1486 , G01N2015/1402 , G01N2015/142 , G01N2015/149
Abstract: Aspects of the present disclosure include methods for characterizing particles of a sample in a flow stream. Methods according to certain embodiments include generating frequency-encoded fluorescence data from a particle of a sample in a flow stream; and calculating phase-corrected spatial data of the particle by performing a transform of the frequency-encoded fluorescence data with a phase correction component. In certain embodiments, methods include generating an image of the particle in the flow stream based on the phase-corrected spatial data. Systems having a processor with memory operably coupled to the processor having instructions stored thereon, which when executed by the processor, cause the processor to calculate phase-corrected spatial data from frequency-encoded fluorescence data of a particle a flow stream are also described. Integrated circuit devices (e.g., field programmable gate arrays) having programming for practicing the subject methods are also provided.
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公开(公告)号:US20210140870A1
公开(公告)日:2021-05-13
申请号:US17153527
申请日:2021-01-20
Applicant: BECTON, DICKINSON AND COMPANY
Inventor: Eric D. Diebold , Keegan Owsley , Jonathan Lin
Abstract: In one aspect, the present teachings provide a system for performing cytometry that can be operated in three operational modes. In one operational mode, a fluorescence image of a sample is obtained by exciting one or more fluorophore(s) present in the sample by an excitation beam formed as a superposition of a top-hat-shaped beam with a plurality of beams that are radiofrequency shifted relative to one another. In another operational mode, a sample can be illuminated successively over a time interval by a laser beam at a plurality of excitation frequencies in a scanning fashion. The fluorescence emission from the sample can be detected and analyzed, e.g., to generate a fluorescence image of the sample. In yet another operational mode, the system can be operated to illuminate a plurality of locations of a sample concurrently by a single excitation frequency, which can be generated, e.g., by shifting the central frequency of a laser beam by a radiofrequency. For example, a horizontal extent of the sample can be illuminated by a laser beam at a single excitation frequency. The detected fluorescence radiation can be used to analyze the fluorescence content of the sample, e.g., a cell/particle.
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公开(公告)号:US20200309671A1
公开(公告)日:2020-10-01
申请号:US16817080
申请日:2020-03-12
Applicant: Becton, Dickinson and Company
Inventor: Jonathan Lin , Matthew Bahr , Keegan Owsley
Abstract: Aspects of the present disclosure include a method for sorting cells of a sample based on an image of a cell in a flow stream. Methods according to certain embodiments include detecting light from a sample having cells in a flow stream, generating an image mask of a cell from the sample and sorting the cell based on the generated image mask. Systems having a processor with memory operably coupled to the processor having instructions stored thereon, which when executed by the processor, cause the processor to generate an image mask of a cell in a sample in a flow stream and to sort the cell based on the generated image mask are also described. Integrated circuit devices (e.g., field programmable gate arrays) having programming for generating an image mask and for determining one or more features of the cell are also provided.
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公开(公告)号:US20190234863A1
公开(公告)日:2019-08-01
申请号:US16382056
申请日:2019-04-11
Applicant: BECTON, DICKINSON AND COMPANY
Inventor: Eric Diebold , Keegan Owsley , Jonathan Lin
CPC classification number: G01N15/1434 , G01N15/1429 , G01N15/147 , G01N21/6402 , G01N21/6428 , G01N2015/1006 , G01N2015/1447 , G01N2015/149 , G01N2021/6439
Abstract: In one aspect, a method of sorting cells in a flow cytometry system is disclosed, which includes illuminating a cell with radiation having at least two optical frequencies shifted from one another by a radiofrequency to elicit fluorescent radiation from the cell, detecting the fluorescent radiation to generate temporal fluorescence data, and processing the temporal fluorescence data to arrive at a sorting decision regarding the cell without generating an image (i.e., a pixel-by-pixel image) of the cell based on the fluorescence data. In some cases, the sorting decision can be made with a latency less than about 100 microseconds. In some embodiments, the above method of sorting cells can have a sub-cellular resolution. In some embodiments, a single radiofrequency shift is employed to separate the optical frequencies while in other such embodiments a plurality of different radiofrequency shifts are employed.
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公开(公告)号:US12105010B2
公开(公告)日:2024-10-01
申请号:US18373487
申请日:2023-09-27
Applicant: Becton, Dickinson and Company
Inventor: Jonathan Lin , Keegan Owsley , Matthew Bahr
IPC: G01N15/14 , G01N15/1429 , G01N15/1434 , G01N15/149 , G01N15/1404
CPC classification number: G01N15/1459 , G01N15/1425 , G01N15/1429 , G01N15/1434 , G01N2015/1402 , G01N2015/142 , G01N2015/1486 , G01N15/149
Abstract: Aspects of the present disclosure include methods for characterizing particles of a sample in a flow stream. Methods according to certain embodiments include generating frequency-encoded fluorescence data from a particle of a sample in a flow stream; and calculating phase-corrected spatial data of the particle by performing a transform of the frequency-encoded fluorescence data with a phase correction component. In certain embodiments, methods include generating an image of the particle in the flow stream based on the phase-corrected spatial data. Systems having a processor with memory operably coupled to the processor having instructions stored thereon, which when executed by the processor, cause the processor to calculate phase-corrected spatial data from frequency-encoded fluorescence data of a particle a flow stream are also described. Integrated circuit devices (e.g., field programmable gate arrays) having programming for practicing the subject methods are also provided.
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公开(公告)号:US12078587B2
公开(公告)日:2024-09-03
申请号:US17953976
申请日:2022-09-27
Applicant: BECTON, DICKINSON AND COMPANY
Inventor: Eric D. Diebold , Keegan Owsley , Jonathan Lin
IPC: G01N15/14 , G01N15/1429 , G01N15/1434 , G01N21/64 , G01N15/10 , G01N15/149
CPC classification number: G01N15/1434 , G01N15/1429 , G01N15/147 , G01N21/6402 , G01N21/6428 , G01N2015/1006 , G01N2015/1447 , G01N15/149 , G01N2021/6439
Abstract: In one aspect, a method of sorting cells in a flow cytometry system is disclosed, which includes illuminating a cell with radiation having at least two optical frequencies shifted from one another by a radiofrequency to elicit fluorescent radiation from the cell, detecting the fluorescent radiation to generate temporal fluorescence data, and processing the temporal fluorescence data to arrive at a sorting decision regarding the cell without generating an image (i.e., a pixel-by-pixel image) of the cell based on the fluorescence data. In some cases, the sorting decision can be made with a latency less than about 100 microseconds. In some embodiments, the above method of sorting cells can have a sub-cellular resolution. In some embodiments, a single radiofrequency shift is employed to separate the optical frequencies while in other such embodiments a plurality of different radiofrequency shifts are employed.
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