The invention refers to a device and a method for handling a fuel assembly (3), which comprises a number of fuel rods extending between a lower part and an upper part of the fuel assembly, a debris filter located in the lower part of the fuel assembly and a casing surrounding the fuel rods. The device comprises a lifting device (15) for engaging, during a lifting operation, a fuel assembly located in a reactor vessel (1) and lifting the fuel assembly upwards and out from the reactor vessel. A conduit member is connected to the upper part of the fuel assembly. A pump (32) creates a flow of water through the conduit member and the fuel assembly during the lifting operation. The flow has such a size that possible debris particles contained in and/or immediately beneath the debris filter at least are retained in and/or immediately beneath the debris filter during the lifting operation.