A method for executing applications in a system comprising general hardware and reconfigurable hardware includes accessing a first execution file comprising metadata storing a first priority indicator associated with a first application, and a second execution file comprising metadata storing a second priority indicator associated with a second application. In an example, use of the reconfigurable hardware is interleaved between the first application and the second application, and the interleaving is scheduled to take into account (i) workload of the reconfigurable hardware and (ii) the first priority indicator and the second priority indicator associated with the first application and the second application, respectively. In an example, when the reconfigurable hardware is used by one of the first and second applications, the general hardware is used by another of the first and second applications.