Fuel used as a coolant in an aircraft can be thermally conditioned for active thermal management of the airframe and engine. The fuel can be thermally conditioned using the residual cooling capacity of a power and thermal module (PTM), providing flexibility of thermal system design, or via a compact engine-mounted turbo cooler, to maximize system efficiency. The fuel can be stored in a thermal reserve tank to provide a missionized heat sink capable serviceable for periodic high heat flux equipment. The cooling and provision of cooled fuel to aircraft components can be intelligently controlled to provide efficient cooling and effectively unlimited ground hold times.