A tomography apparatus includes a data acquirer acquiring a first image and a second image that are partial images, by using data acquired in a first angular section corresponding to a first time point and a second angular section corresponding to a second time and facing the first angular section, by performing a tomography scan on an object that is moving, and acquiring first information indicating a motion amount of the object by using the first image and the second image, and an image reconstructor reconstructing a target image indicating the object at a target time, based on the first information.