A system monitors applications and network flows used during the business transaction to determine distributed business transaction anomalies caused at least in part by network performance issues. A network flow associated with a business transaction is monitored by a network agent. The network agent may capture packets, analyze the packets and other network data to determine one or more baselines, and dynamically compare subsequent network flow performance to those baselines to determine an anomaly. When an anomaly in a network flow is detected, this information may be provided to a user along with other data regarding a business transaction that is utilizing the network flow. Concurrently with the network agent monitoring, application agents may monitor one or more applications performing the business transaction. The present system reports performance data for a business transaction in terms of application performance and network performance, all in the context of a distributed business transaction.