A control unit for a rotary electric machine control system includes a first current command module, a second current command module and a change module. The first current command module controls the rotary electric machine based on a maximum efficiency characteristic line. The second current command module controls the rotary electric machine based on an early switching characteristic line, which is set at a retard angle side relative to the maximum efficiency characteristic line with a predetermined phase difference. When a control mode is switched over to a rectangular wave voltage phase control mode from an overmodulation current control mode in accordance with an increase in torque, the change module changes the current command from the first current command module to the second command current module.