X-ray images generated by a biopsy tissue handling apparatus are selectively modified to emphasize areas of interest and deemphasize or eliminate image areas that are distracting, impair view attention and/or contribute to eye fatigue, An image processor executes image masks based on a geometric configuration of a portion of a specimen tray including a storage compartment with tissue specimen, A compartment mask executes on a portion of X-ray image depicting storage compartment including tissue specimen. Compartment mask boundary substantially corresponds to a contour of compartment. Partial structure mask executes on a portion of X-ray image depicting respective walls of specimen tray and storage compartment. Partial structure mask boundary extends along respective lengths and partially through respective walls of specimen tray.