The present invention relates to a food container made of a plastic material and having a nano-structured hydrophobic surface, including: a plurality of nano-structures formed on a surface of the food container; and a first hydrophobic thin film coated on an upper side of the surface, on which the nano-structures are formed, and a manufacturing method thereof. According to the present invention, it is possible to provide the food container having the nano-structured hydrophobic surface capable of having excellent gas blocking performance, as well as hydrophobicity, and the manufacturing method thereof.