A fuel cell stack and a manufacturing method thereof are disclosed. In one embodiment, the fuel cell stack includes: i) a membrane electrode assembly configured of an anode electrode, a cathode electrode, and a polymer electrolyte membrane positioned therebetween, ii) a first plate including a fuel flow channel facing the anode electrode and contacting the anode electrode and iii) a second plate including an oxidant flow channel facing the cathode electrode and contacting the cathode electrode, wherein the membrane electrode assembly, the first bipolar plate, and the second bipolar plate each includes a stack direction display parts, which are arranged in a line. At least one embodiment of the invention is capable of preventing an anode surface and a cathode surface of a part from being reversely stacked in manufacturing a stack type fuel cell.