According to certain aspects, a system may include a data agent configured to: process a database file residing on a primary storage device(s) to identify a subset of data in the database file for archiving, the database file generated by a database application; and extract the subset of the data from the database file and store the subset of the data in an archive file on the primary storage device(s) as a plurality of blocks having a common size; and at least one secondary storage controller computer configured to, as part of a secondary copy operation in which the archive file is copied to a secondary storage device(s): copy the plurality of blocks to the secondary storage devices to create a secondary copy of the archive file; and create a table that provides a mapping between the copied plurality of blocks and corresponding locations in the secondary storage device(s).