The disclosed computer-implemented method for managing a need-to-know domain name system may include (i) intercepting, by an agent of the computing device, network traffic received on the computing device, (ii) generating, by the agent, a one-time password based on a unique identifier of the agent of the computing device, (iii) wrapping, by the agent, the network traffic with the one-time password, and (iv) pushing, by the agent, the wrapped network traffic to a cloud server using a local domain name system (DNS) of the agent of the computing device, wherein the local DNS comprises a private domain name unpublished in a global DNS. Various other methods, systems, and computer-readable media are also disclosed.